Package: exonr 0.9.0
exonr: Scientific Data Processing
This package provides a set of tools for processing scientific data. It's based on the exon Rust package.
Authors:
exonr_0.9.0.tar.gz
exonr_0.9.0.zip(r-4.5)exonr_0.9.0.zip(r-4.4)exonr_0.9.0.zip(r-4.3)
exonr_0.9.0.tgz(r-4.4-x86_64)exonr_0.9.0.tgz(r-4.4-arm64)exonr_0.9.0.tgz(r-4.3-x86_64)exonr_0.9.0.tgz(r-4.3-arm64)
exonr_0.9.0.tar.gz(r-4.5-noble)exonr_0.9.0.tar.gz(r-4.4-noble)
exonr.pdf |exonr.html✨
exonr/json (API)
# Install 'exonr' in R: |
install.packages('exonr', repos = c('https://wheretrue.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/wheretrue/exon/issues
arrowbioinformaticsdatafusionngsproteomicsrustsql
Last updated 3 months agofrom:eafd610f14. Checks:OK: 1 WARNING: 8. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 03 2024 |
R-4.5-win-x86_64 | WARNING | Nov 03 2024 |
R-4.5-linux-x86_64 | WARNING | Nov 03 2024 |
R-4.4-win-x86_64 | WARNING | Nov 03 2024 |
R-4.4-mac-x86_64 | WARNING | Nov 03 2024 |
R-4.4-mac-aarch64 | WARNING | Nov 03 2024 |
R-4.3-win-x86_64 | WARNING | Nov 03 2024 |
R-4.3-mac-x86_64 | WARNING | Nov 03 2024 |
R-4.3-mac-aarch64 | WARNING | Nov 03 2024 |
Exports:ExonDataFrameExonRSessionContextread_bed_fileread_fasta_fileread_fastq_fileread_genbank_fileread_gff_fileread_inferred_exon_tableread_mzml_fileread_sam_fileread_vcf_file
Dependencies:arrowassertthatbitbit64clicpp11gluelifecyclemagrittrnanoarrowpurrrR6rlangtidyselectvctrswithr
Readme and manuals
Help Manual
Help page | Topics |
---|---|
An ExonDataFrame is a data frame that is backed by an Exon engine. | ExonDataFrame |
ExonR | exonr |
An ExonRSessionContext is a context for an Exon session. | ExonRSessionContext |
Read BED File | read_bed_file |
Read FASTA File | read_fasta_file |
Read FASTQ File | read_fastq_file |
Read GenBank File | read_genbank_file |
Read GFF File | read_gff_file |
Copy the inferred exon table from the given path into the given stream. | read_inferred_exon_table |
Copy the inferred exon table from the given path into the given stream. | read_inferred_exon_table_r |
Read MzML File | read_mzml_file |
Read SAM/BAM File | read_sam_file |
Read VCF/BCF File | read_vcf_file |